FROM mambaorg/micromamba:2.0.5
RUN micromamba install -y -n base -c conda-forge python=3.11 numpy scipy sympy six lifelines pip 2>&1 | tail -3 \
 && /opt/conda/bin/pip install --no-cache-dir --no-deps "ete3==3.1.3" "treesimulator==0.2.30" \
 && micromamba clean -afy \
 && find /opt/conda -name '*.a' -delete \
 && find /opt/conda -name '__pycache__' -prune -exec rm -rf {} + 
ENV PATH=/opt/conda/bin:$PATH LANG=C.UTF-8 HOME=/tmp
USER 65534:65534
WORKDIR /work/out
ENTRYPOINT []
